Jonesia denitrificans 55134

Gram-positiveRodNon-motileFacultative

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Jonesiaceae

Genus

Jonesia

Description

Jonesia denitrificans 55134 is a Gram-positive, facultatively anaerobic bacterium characterized as a chemoorganoheterotroph. This bacterium has a rod-shaped morphology and is non-motile. It thrives optimally at a temperature of 37°C and falls within the mesophilic temperature range. The organism possesses two replicons, which indicates a complex genomic structure. It is classified as free-living, suggesting that it can exist independently in various environments without the need for a host organism. The ability to utilize organic compounds for energy and carbon signifies its role in nutrient cycling within its ecological niche. The presence of two replicons may provide Jonesia denitrificans 55134 with genetic flexibility, which can be advantageous in adapting to different environmental conditions or metabolic processes. The organism's facultative anaerobic nature allows it to survive in both the presence and absence of oxygen, enhancing its ecological versatility. Overall, Jonesia denitrificans 55134 demonstrates significant adaptability as a free-living organism in diverse environments, potentially influencing carbon and nitrogen cycling through its metabolic capabilities. Its specific traits could make it a valuable subject for studies on microbial ecology and biogeochemical processes. Accessions for this strain include LS483423.1 and CP077403.1, which can be referenced for further genomic and biochemical investigations.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyJonesiaceae
GenusJonesia
SpeciesJonesia denitrificans
Strain55134

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
Habitatcooked ox blood
Biotic relationshipFree living
Host(s)Metazoa, Vertebrata
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph
PathogenicityAnimal

Genome Summary

Jonesia denitrificans 55134, Complete Genome

Gene Summary

Adenine Count

572305 bp

Thymine Count

571090 bp

Guanine Count

801870 bp

Cytosine Count

804382 bp

Genome Length

2749647 bp

Protein-coding Genes

2483 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitiveNCTC10816_00436P35170Positive448103 - 44919739033.3
vibriobactin utilization protein viubNCTC10816_00437Q56743Positive449359 - 45032435712.9
probable siderophore transport system permease protein yfiz precursorNCTC10816_00438O31568Positive450321 - 45132834149.8
probable siderophore transport system permease protein yfhaNCTC10816_00439O31569Positive451325 - 45239235642.7
probable siderophore transport system atp-binding protein yusvNCTC10816_00440Q47087Positive452389 - 45324630234.6
putative abc transporter substrate-binding lipoprotein yhfq precursorNCTC10816_00441Q81L65Positive453274 - 45430235856.5
uncharacterised proteinNCTC10816_00442Not AvailablePositive454369 - 45543937548.4
Trna-proNot AvailableNot AvailablePositive455556 - 455629Not Available
serine/threonine exchanger stetNCTC10816_00444P9WQM2Negative455687 - 45694942545.9
Trna-proNot AvailableNot AvailablePositive457103 - 457179Not Available

Displaying genes 561 – 570 of 5196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.