Treponema pedis T3552B

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Treponematales

Family

Treponemataceae

Genus

Treponema

Description

Treponema pedis T3552B is a Gram-negative bacterium characterized by its spirilla shape. This organism possesses flagella, which are critical for its motility and may play a role in its ecological interactions. Treponema pedis T3552B has a single replicon, indicating a simplified genomic structure that can influence its replication and genetic stability. The genomic data for Treponema pedis T3552B is accessible under the accession number CP045670.1, which allows for further investigation into its genetic makeup and potential functional attributes. As a member of the Treponema genus, this species is likely involved in complex interactions in its environment, particularly within soil and animal-associated ecosystems, where members of this genus are often found. The specific traits of Treponema pedis T3552B, such as its Gram-negative status and the presence of flagella, suggest that it may be well-adapted to its niche, potentially contributing to nutrient cycling and influencing microbial community dynamics. Understanding these traits can provide insights into the ecological roles of Treponema species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderTreponematales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema pedis
StrainT3552B

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema pedis T3552B
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bos, Equidae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema pedis T3552B, Complete Genome

Gene Summary

Adenine Count

912410 bp

Thymine Count

911752 bp

Guanine Count

536769 bp

Cytosine Count

528459 bp

Genome Length

2889390 bp

Protein-coding Genes

2642 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine--trna ligaseDYQ05_09465O83650Negative2015658 - 201719359392.0
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDYQ05_09470P0DV65Negative2017380 - 201922470004.3
duf1015 domain-containing proteinDYQ05_09475Not AvailablePositive2019332 - 202067250598.7
holliday junction branch migration dna helicase ruvbDYQ05_09480P61538Negative2020765 - 202180238079.0
hypothetical proteinDYQ05_09485Q04944Negative2021811 - 202298744119.4
glucose-1-phosphate adenylyltransferaseDYQ05_09490B7K5U7Positive2023325 - 202459647191.1
atp-dependent clp protease atp-binding subunitDYQ05_09495Q54316Negative2024593 - 202711595215.0
atp--guanido phosphotransferaseDYQ05_09500Q65PD7Negative2027134 - 202820139362.4
hypothetical proteinDYQ05_09505Q2G0P7Negative2028185 - 202868819236.5
abc transporter permeaseDYQ05_09510P57061Negative2028685 - 203001949154.1

Displaying genes 1881 – 1890 of 2696 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.