Treponema pedis T3552B

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Treponematales

Family

Treponemataceae

Genus

Treponema

Description

Treponema pedis T3552B is a Gram-negative bacterium characterized by its spirilla shape. This organism possesses flagella, which are critical for its motility and may play a role in its ecological interactions. Treponema pedis T3552B has a single replicon, indicating a simplified genomic structure that can influence its replication and genetic stability. The genomic data for Treponema pedis T3552B is accessible under the accession number CP045670.1, which allows for further investigation into its genetic makeup and potential functional attributes. As a member of the Treponema genus, this species is likely involved in complex interactions in its environment, particularly within soil and animal-associated ecosystems, where members of this genus are often found. The specific traits of Treponema pedis T3552B, such as its Gram-negative status and the presence of flagella, suggest that it may be well-adapted to its niche, potentially contributing to nutrient cycling and influencing microbial community dynamics. Understanding these traits can provide insights into the ecological roles of Treponema species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderTreponematales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema pedis
StrainT3552B

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema pedis T3552B
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bos, Equidae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema pedis T3552B, Complete Genome

Gene Summary

Adenine Count

912410 bp

Thymine Count

911752 bp

Guanine Count

536769 bp

Cytosine Count

528459 bp

Genome Length

2889390 bp

Protein-coding Genes

2642 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidase family proteinDYQ05_07860P54304Negative1678937 - 168020547353.8
flavodoxinDYQ05_07865Q57746Negative1680281 - 168078419170.9
hypothetical proteinDYQ05_07870Q81LM1Negative1680816 - 168160228793.1
iron abc transporter permeaseDYQ05_07875P49937Negative1681614 - 168259134632.9
iron abc transporter substrate-binding proteinDYQ05_07880A7X153Negative1682626 - 168357034962.6
hypothetical proteinDYQ05_07885Q8RY11Positive1683778 - 168553665202.3
phosphoribosylamine--glycine ligaseDYQ05_07890P20772Negative1685646 - 168695647644.5
d-alanine--d-alanine ligase aDYQ05_07895Q73JN2Positive1687090 - 168819641391.9
hypothetical proteinDYQ05_07900Not AvailablePositive1688216 - 168884224625.1
nad(p)h-hydrate dehydrataseDYQ05_07905Q9ZJM4Positive1688848 - 169032953318.0

Displaying genes 1561 – 1570 of 2696 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.