Paenibacillus sonchi X19-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sonchi X19-5 is characterized by possessing three replicons, indicating a complex genomic organization that could potentially contribute to its adaptability and resilience in various environments. The genomic data for this strain is accessible through three specific accession numbers: CP068595.1, CP068596.1, and CP068597.1. These sequences provide insights into its genetic makeup and can be instrumental for further research into its functional capabilities. Paenibacillus species are known for their diverse metabolic capabilities and ecological roles, often found in soil and plant environments where they contribute to nutrient cycling and plant growth promotion. The presence of multiple replicons might suggest a potential for horizontal gene transfer, which can enhance the ability of this bacterium to adapt to different ecological niches or stresses. Overall, the genetic structure of Paenibacillus sonchi X19-5, as represented by its three replicons, may play a significant role in its ecological interactions and functional diversity. Understanding these traits could provide valuable insights into the ecological significance of this bacterium and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sonchi
StrainX19-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sonchi X19-5, Complete Genome

Gene Summary

Adenine Count

1840547 bp

Thymine Count

1841757 bp

Guanine Count

1893844 bp

Cytosine Count

1901384 bp

Genome Length

7477532 bp

Protein-coding Genes

6581 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaJI735_32455O31404Negative7208277 - 720929337192.2
pts glucose transporter subunit iiaJI735_32460Q8CZD5Negative7209586 - 721006517320.9
murr/rpir family transcriptional regulatorJI735_32465Q45581Negative7210086 - 721095531527.1
duf871 domain-containing proteinJI735_32470A0A0H2XHV5Negative7211003 - 721205239901.7
pts transporter subunit eiicJI735_32475Q4L8H5Negative7212092 - 721356151604.6
n-acetylmuramic acid 6-phosphate etheraseJI735_32480Q73D01Negative7213564 - 721447532406.2
d-ala-d-ala dipeptidase vanxJI735_32485Q06241Negative7214687 - 721529523453.7
d-alanine--(r)-lactate ligaseJI735_32490P25051Negative7215301 - 721633237550.3
d-lactate dehydrogenase vanhJI735_32495Q05709Negative7216325 - 721729335316.9
vanz family proteinJI735_32500Q06242Negative7217492 - 721798318289.3

Displaying genes 6491 – 6500 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.