Paenibacillus sonchi X19-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sonchi X19-5 is characterized by possessing three replicons, indicating a complex genomic organization that could potentially contribute to its adaptability and resilience in various environments. The genomic data for this strain is accessible through three specific accession numbers: CP068595.1, CP068596.1, and CP068597.1. These sequences provide insights into its genetic makeup and can be instrumental for further research into its functional capabilities. Paenibacillus species are known for their diverse metabolic capabilities and ecological roles, often found in soil and plant environments where they contribute to nutrient cycling and plant growth promotion. The presence of multiple replicons might suggest a potential for horizontal gene transfer, which can enhance the ability of this bacterium to adapt to different ecological niches or stresses. Overall, the genetic structure of Paenibacillus sonchi X19-5, as represented by its three replicons, may play a significant role in its ecological interactions and functional diversity. Understanding these traits could provide valuable insights into the ecological significance of this bacterium and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sonchi
StrainX19-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sonchi X19-5, Complete Genome

Gene Summary

Adenine Count

1840547 bp

Thymine Count

1841757 bp

Guanine Count

1893844 bp

Cytosine Count

1901384 bp

Genome Length

7477532 bp

Protein-coding Genes

6581 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclaseJI735_29505Q9A5I5Negative6573717 - 657510252662.3
hpt domain-containing proteinJI735_29510Not AvailableNegative6575003 - 657535614047.9
act domain-containing proteinJI735_29515Q8G509Positive6575588 - 657585710061.4
pfl family proteinJI735_29520A9KNY7Positive6575907 - 657726547816.3
sigma-70 family rna polymerase sigma factorJI735_29525L0TCG5Negative6578154 - 657909234429.4
carboxymuconolactone decarboxylase family proteinJI735_29530P96684Negative6579135 - 657958116942.7
site-specific integraseJI735_29535Q180E3Negative6580071 - 658153651588.3
winged helix-turn-helix transcriptional regulatorJI735_29540P37503Positive6581698 - 658213216306.8
ybak/ebsc family proteinJI735_29545P71000Positive6582291 - 658279718237.6
mfs transporterJI735_29550P77389Positive6582794 - 658403243514.6

Displaying genes 5901 – 5910 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.