Paenibacillus sonchi X19-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sonchi X19-5 is characterized by possessing three replicons, indicating a complex genomic organization that could potentially contribute to its adaptability and resilience in various environments. The genomic data for this strain is accessible through three specific accession numbers: CP068595.1, CP068596.1, and CP068597.1. These sequences provide insights into its genetic makeup and can be instrumental for further research into its functional capabilities. Paenibacillus species are known for their diverse metabolic capabilities and ecological roles, often found in soil and plant environments where they contribute to nutrient cycling and plant growth promotion. The presence of multiple replicons might suggest a potential for horizontal gene transfer, which can enhance the ability of this bacterium to adapt to different ecological niches or stresses. Overall, the genetic structure of Paenibacillus sonchi X19-5, as represented by its three replicons, may play a significant role in its ecological interactions and functional diversity. Understanding these traits could provide valuable insights into the ecological significance of this bacterium and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sonchi
StrainX19-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sonchi X19-5, Complete Genome

Gene Summary

Adenine Count

1840547 bp

Thymine Count

1841757 bp

Guanine Count

1893844 bp

Cytosine Count

1901384 bp

Genome Length

7477532 bp

Protein-coding Genes

6581 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseJI735_21605P94548Positive4876535 - 487713821846.0
abc-f family atp-binding cassette domain-containing proteinJI735_21610O06476Positive4877184 - 487912172019.9
tetratricopeptide repeat proteinJI735_21615Not AvailablePositive4879230 - 487971518013.5
hypothetical proteinJI735_21620Not AvailablePositive4879896 - 488038718755.7
phosphodiester glycosidase family proteinJI735_21625Not AvailableNegative4880474 - 488131029934.7
m42 family metallopeptidaseJI735_21630O07603Negative4881294 - 488233736941.4
duf1049 domain-containing proteinJI735_21635O32045Negative4882464 - 488278411423.2
oligoendopeptidase fJI735_21640O31605Negative4882871 - 488466168294.1
hypothetical proteinJI735_21645Not AvailableNegative4884919 - 48850896145.08
hypothetical proteinJI735_21650Not AvailableNegative4885096 - 48853299484.34

Displaying genes 4321 – 4330 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.