Paenibacillus sonchi X19-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sonchi X19-5 is characterized by possessing three replicons, indicating a complex genomic organization that could potentially contribute to its adaptability and resilience in various environments. The genomic data for this strain is accessible through three specific accession numbers: CP068595.1, CP068596.1, and CP068597.1. These sequences provide insights into its genetic makeup and can be instrumental for further research into its functional capabilities. Paenibacillus species are known for their diverse metabolic capabilities and ecological roles, often found in soil and plant environments where they contribute to nutrient cycling and plant growth promotion. The presence of multiple replicons might suggest a potential for horizontal gene transfer, which can enhance the ability of this bacterium to adapt to different ecological niches or stresses. Overall, the genetic structure of Paenibacillus sonchi X19-5, as represented by its three replicons, may play a significant role in its ecological interactions and functional diversity. Understanding these traits could provide valuable insights into the ecological significance of this bacterium and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sonchi
StrainX19-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sonchi X19-5, Complete Genome

Gene Summary

Adenine Count

1840547 bp

Thymine Count

1841757 bp

Guanine Count

1893844 bp

Cytosine Count

1901384 bp

Genome Length

7477532 bp

Protein-coding Genes

6581 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulatorJI735_20855P71039Positive4714972 - 471572728176.7
sugar phosphate isomerase/epimeraseJI735_20860A5YBJ9Negative4715864 - 471669130321.2
gfo/idh/moca family oxidoreductaseJI735_20865B1G894Positive4716896 - 471788835724.9
site-specific integraseJI735_20870O32215Positive4718253 - 472030676177.8
lyttr family transcriptional regulator dna-binding domain-containing proteinJI735_20875Q82Z76Positive4720430 - 472087316995.8
hypothetical proteinJI735_20880Not AvailablePositive4720886 - 472132316218.2
s8 family peptidaseJI735_20885O31788Negative4721390 - 472264645191.1
hypothetical proteinJI735_20890Not AvailablePositive4722841 - 472318512877.7
hypothetical proteinJI735_20895Not AvailablePositive4723412 - 472440437772.6
duf4111 domain-containing proteinJI735_20900Q4VR96Positive4724459 - 472522928239.8

Displaying genes 4171 – 4180 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.