Paenibacillus sonchi X19-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sonchi X19-5 is characterized by possessing three replicons, indicating a complex genomic organization that could potentially contribute to its adaptability and resilience in various environments. The genomic data for this strain is accessible through three specific accession numbers: CP068595.1, CP068596.1, and CP068597.1. These sequences provide insights into its genetic makeup and can be instrumental for further research into its functional capabilities. Paenibacillus species are known for their diverse metabolic capabilities and ecological roles, often found in soil and plant environments where they contribute to nutrient cycling and plant growth promotion. The presence of multiple replicons might suggest a potential for horizontal gene transfer, which can enhance the ability of this bacterium to adapt to different ecological niches or stresses. Overall, the genetic structure of Paenibacillus sonchi X19-5, as represented by its three replicons, may play a significant role in its ecological interactions and functional diversity. Understanding these traits could provide valuable insights into the ecological significance of this bacterium and its potential applications in agriculture or bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sonchi
StrainX19-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sonchi X19-5, Complete Genome

Gene Summary

Adenine Count

1840547 bp

Thymine Count

1841757 bp

Guanine Count

1893844 bp

Cytosine Count

1901384 bp

Genome Length

7477532 bp

Protein-coding Genes

6581 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate-1-semialdehyde 2,1-aminomutaseJI735_12155Q65M82Negative2644845 - 264616146847.8
lcp family proteinJI735_12160Q7BHL7Negative2646326 - 264737838346.0
thioredoxin-dependent thiol peroxidaseJI735_12165Q796Y8Positive2647481 - 264794817412.1
2-hydroxyacyl-coa dehydrataseJI735_12170P11568Positive2648068 - 2652363156431.0
dinb family proteinJI735_12175Not AvailableNegative2652479 - 265316525921.8
marr family transcriptional regulatorJI735_12180O32181Positive2653405 - 265386017485.2
dha2 family efflux mfs transporter permease subunitJI735_12185P54585Positive2653857 - 265538655316.7
yafy family transcriptional regulatorJI735_12190O34920Negative2655553 - 265649135151.3
mfs transporterJI735_12195O31561Positive2656638 - 265792745225.9
site-specific integraseJI735_12200O31453Negative2657950 - 265862024721.2

Displaying genes 2431 – 2440 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.