Clostridium saccharoperbutylacetonicum N1-4(HMT)

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium saccharoperbutylacetonicum N1-4(HMT) is a bacterium characterized by its unique metabolic capabilities. It possesses two replicons, which are essential for its genetic stability and replication processes. The organism has been documented in two accessions: CP004121.1 and CP004122.1, which provide nucleotide sequences that are crucial for understanding its genetic makeup. This bacterium is notable for its ability to produce solvents, particularly butanol, acetone, and ethanol, through a fermentation process. Such metabolic traits make it of significant interest in biotechnology, particularly in the production of biofuels and solvents from renewable biomass sources. The capacity to convert sugars into these solvents positions C. saccharoperbutylacetonicum as a potential candidate for sustainable industrial applications. In terms of ecological insights, C. saccharoperbutylacetonicum N1-4(HMT) plays a role in the degradation of organic materials, contributing to the recycling of nutrients in its environment. Its fermentation process not only aids in energy production but also influences the microbial community structure by providing substrates for other microorganisms. The ability to thrive in anaerobic conditions further highlights its adaptability and ecological significance within various environments, particularly in agricultural and waste management contexts. Overall, this bacterium represents a valuable asset in both ecological and industrial microbiology domains.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium saccharoperbutylacetonicum
StrainN1-4(HMT)

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium saccharoperbutylacetonicum N1-4(HMT), Complete Genome

Gene Summary

Adenine Count

2326767 bp

Thymine Count

2274360 bp

Guanine Count

986533 bp

Cytosine Count

942597 bp

Genome Length

6530257 bp

Protein-coding Genes

5601 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCspa_c38300Not AvailablePositive4143550 - 41437567497.02
peptidase u32Cspa_c38310O32034Negative4143847 - 414506746393.5
branched-chain amino acid transport system carrier protein brnqCspa_c38320A2RJ04Negative4145593 - 414694248609.2
proline--trna ligase prosCspa_c38330A0Q2I3Negative4147284 - 414872654825.6
hypothetical proteinCspa_c38340Not AvailableNegative4149103 - 414936310055.6
putative metal-dependent phosphoesteraseCspa_c38350C8WJZ5Negative4149451 - 415032633237.7
putative metal-dependent hydrolaseCspa_c38360A0A848M4Z0Negative4150338 - 415103926629.5
small, acid-soluble spore protein, alpha/beta typeCspa_c38370P22066Positive4151484 - 41516907302.56
nadh pyrophosphatase nudcCspa_c38380A5UGU3Negative4151782 - 415260331561.1
hypothetical proteinCspa_c38390O69704Positive4153218 - 415397327463.0

Displaying genes 3851 – 3860 of 5935 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

243 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003070D-methionineC5H11NO2SChemical structure of D-methionine348-67-4
Average149.211Da
Monoisotopic149.0510493Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0003208L-2-acetamido-6-oxoheptanedioateC9H11NO6Chemical structure of L-2-acetamido-6-oxoheptanedioateNot available
Average229.189Da
Monoisotopic229.059734238Da

Displaying 1–10 of 243 metabolites

Health Effects

No health effects information available for this bacterium.