Rhizobium radiobacter

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Rhizobium radiobacter is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This organism is notably found in diverse habitats, including the Beibu Gulf, seawater, and on skin surfaces. Its adaptability to various environments highlights its ecological versatility. The genomic structure of Rhizobium radiobacter is defined by the presence of three replicons, which may contribute to its genetic diversity and ability to thrive in different ecological niches. The specific accession numbers associated with its genomic data are CP019701.2, CP019702.2, and CP019703.3, which provide a basis for further genomic and phylogenetic studies. The presence of Rhizobium radiobacter in marine environments such as the Beibu Gulf suggests potential interactions with marine ecosystems, including roles in nutrient cycling. Additionally, its ability to inhabit skin surfaces may indicate a relationship with host organisms, potentially influencing skin microbiomes or serving as a model for studying symbiotic relationships. Understanding the ecological roles of Rhizobium radiobacter can shed light on its contributions to both marine and terrestrial ecosystems, as well as its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium radiobacter
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium radiobacter
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBeibu Gulf; seawater; skin
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium radiobacter , Complete Genome

Gene Summary

Adenine Count

608051 bp

Thymine Count

600898 bp

Guanine Count

887910 bp

Cytosine Count

906491 bp

Genome Length

3003350 bp

Protein-coding Genes

2897 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseB0909_02590Q8UDM6Negative1793126 - 179453548901.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseB0909_02585Q8UDM5Negative1794539 - 179563939115.0
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseB0909_02580Q92H60Negative1795663 - 179709650720.1
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseB0909_02575Q8UDM3Negative1797093 - 179856251147.3
penicillin-binding protein 2B0909_02570B8H0A0Negative1798622 - 180036462907.7
hypothetical proteinB0909_02565Not AvailableNegative1800364 - 180091819613.7
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhB0909_02560P58745Negative1800920 - 180194536199.5
transcriptional regulator mrazB0909_02555P58768Negative1801960 - 180240016189.4
type ii toxin-antitoxin system rele/pare family toxinB0909_02550Q9A459Negative1802818 - 180316212645.1
type ii toxin-antitoxin system pard family antitoxinB0909_02545Not AvailableNegative1803242 - 180352010076.0

Displaying genes 1871 – 1880 of 5271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.