Rhizobium radiobacter

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Rhizobium radiobacter is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This organism is notably found in diverse habitats, including the Beibu Gulf, seawater, and on skin surfaces. Its adaptability to various environments highlights its ecological versatility. The genomic structure of Rhizobium radiobacter is defined by the presence of three replicons, which may contribute to its genetic diversity and ability to thrive in different ecological niches. The specific accession numbers associated with its genomic data are CP019701.2, CP019702.2, and CP019703.3, which provide a basis for further genomic and phylogenetic studies. The presence of Rhizobium radiobacter in marine environments such as the Beibu Gulf suggests potential interactions with marine ecosystems, including roles in nutrient cycling. Additionally, its ability to inhabit skin surfaces may indicate a relationship with host organisms, potentially influencing skin microbiomes or serving as a model for studying symbiotic relationships. Understanding the ecological roles of Rhizobium radiobacter can shed light on its contributions to both marine and terrestrial ecosystems, as well as its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium radiobacter
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium radiobacter
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatBeibu Gulf; seawater; skin
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium radiobacter , Complete Genome

Gene Summary

Adenine Count

608051 bp

Thymine Count

600898 bp

Guanine Count

887910 bp

Cytosine Count

906491 bp

Genome Length

3003350 bp

Protein-coding Genes

2897 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine-5-phosphate glycosidaseB0909_03625Q1MFZ6Positive1596527 - 159745032471.0
cell envelope biogenesis protein ompaB0909_03620P22263Negative1597738 - 159999683391.3
hypothetical proteinB0909_24695Not AvailableNegative1600072 - 16002215311.41
amino acid abc transporterB0909_03615G3XD47Positive1600336 - 160110927637.9
abc transporter permeaseB0909_03610P35118Positive1601222 - 160202528465.4
abc transporter permease subunitB0909_03605P35113Positive1602022 - 160285231073.7
aspartate-semialdehyde dehydrogenaseB0909_03600P12288Positive1603022 - 160328810576.8
class i sam-dependent methyltransferaseB0909_03595Q31GD8Positive1603373 - 160419729898.4
aliphatic sulfonate abc transporter substrate-binding proteinB0909_03590P75853Negative1604363 - 160532833772.6
lrp/asnc family transcriptional regulatorB0909_03585P0ACJ7Negative1605616 - 160610418708.8

Displaying genes 1661 – 1670 of 5271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.