Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama-like transporter family protein | D560_0021 | Q92JG1 | Positive | 20302 - 21213 | 32260.3 |
| nad binding domain of 6-phosphogluconate dehydrogenase family protein | D560_0022 | A8GD46 | Negative | 21335 - 22177 | 30695.2 |
| aminotransferase class-iii family protein | D560_0023 | Q84P52 | Positive | 22380 - 23753 | 49978.7 |
| ftsk/spoiiie family protein | D560_0024 | P39342 | Negative | 24061 - 25572 | 53509.7 |
| dna-binding regulatory, yebc/pmpr family protein | D560_0025 | Q2KYW0 | Positive | 25725 - 26456 | 26263.9 |
| phosphoribosylglycinamide synthetase, n domain protein | D560_0026 | Q8XXC4 | Positive | 26650 - 26823 | 6127.12 |
| phosphoribosylamine--glycine ligase | D560_0027 | Q8XXC4 | Positive | 26793 - 27863 | 38376.8 |
| coproporphyrinogen iii oxidase family protein | D560_0028 | Q7WL80 | Positive | 27871 - 28272 | 14586.4 |
| coproporphyrinogen iii oxidase family protein | D560_0029 | Q7WL80 | Positive | 28422 - 28778 | 13473.8 |
| cytidylyltransferase family protein | D560_0030 | Q2KYV6 | Positive | 28775 - 28942 | 5895.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




