Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meta domain protein | D560_0983 | Not Available | Negative | 922866 - 923654 | 27893.5 |
| hypothetical protein | D560_0984 | Not Available | Negative | 923854 - 923982 | 5091.55 |
| excinuclease abc subunit a | D560_0985 | Q56242 | Positive | 924355 - 930117 | 210069.0 |
| aminodeoxychorismate synthase, component i | D560_0986 | P12680 | Positive | 930124 - 931254 | 41606.5 |
| aminotransferase class iv family protein | D560_0987 | O42951 | Positive | 931262 - 931894 | 23705.7 |
| thif family protein | D560_0988 | Q46927 | Negative | 931909 - 932745 | 28874.9 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | D560_0989 | P45217 | Negative | 932742 - 934112 | 49652.8 |
| abc transporter family protein | D560_0990 | Q2KVS6 | Negative | 934109 - 936076 | 70506.6 |
| efflux transporter, rnd family, mfp subunit | D560_0991 | P64176 | Negative | 936073 - 937254 | 42234.4 |
| major facilitator superfamily protein | D560_0992 | P9WJW8 | Positive | 937685 - 938821 | 40389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




