Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0963 | Q9EXL7 | Positive | 904545 - 905258 | 26100.9 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0964 | Q04778 | Positive | 905463 - 906374 | 33207.1 |
| mandelate racemase / muconate lactonizing enzyme, c-terminal domain protein | D560_0965 | Q97U96 | Positive | 906458 - 907633 | 42569.0 |
| tripartite tricarboxylate transporter receptor family protein | D560_0966 | Q45389 | Positive | 907681 - 908670 | 35139.7 |
| putative antibiotic resistance | D560_0967 | A6VCX3 | Negative | 908702 - 909223 | 18747.6 |
| xre family transcriptional regulator | D560_0968 | Not Available | Negative | 909276 - 909671 | 14260.2 |
| hypothetical protein | D560_0969 | Not Available | Negative | 909989 - 910588 | 22015.2 |
| 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | D560_0970 | P19992 | Negative | 910811 - 911605 | 28271.1 |
| tripartite tricarboxylate transporter receptor family protein | D560_0971 | Q45389 | Negative | 911602 - 912063 | 16319.8 |
| tripartite tricarboxylate transporter receptor family protein | D560_0972 | Q45389 | Negative | 912050 - 912553 | 18049.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




