Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase / muconate lactonizing enzyme, n-terminal domain protein | D560_0953 | P11444 | Negative | 894594 - 895022 | 14866.5 |
| abc transporter family protein | D560_0954 | P21630 | Negative | 895055 - 895750 | 24889.0 |
| abc transporter family protein | D560_0955 | P21629 | Negative | 895773 - 896273 | 18146.0 |
| branched-chain amino acid transport system / permease component family protein | D560_0956 | P21628 | Negative | 896535 - 897437 | 31073.2 |
| branched-chain amino acid transport system / permease component family protein | D560_0957 | P0AEX8 | Negative | 897467 - 898339 | 29506.1 |
| (s)-mandelate dehydrogenase | D560_0958 | P20932 | Negative | 898332 - 899489 | 41195.8 |
| periplasmic binding family protein | D560_0959 | Not Available | Negative | 899500 - 899979 | 17248.8 |
| periplasmic binding domain protein | D560_0960 | Q8YBN1 | Negative | 900019 - 900654 | 22237.1 |
| pyruvate ferredoxin/flavodoxin oxidoreductase family protein | D560_0961 | Not Available | Negative | 900746 - 902131 | 50161.6 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_0962 | P80910 | Negative | 902253 - 904391 | 76324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




