Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family protein | D560_0943 | P23484 | Negative | 885230 - 885718 | 18325.2 |
| tripartite tricarboxylate transporter receptor family protein | D560_0944 | Q45389 | Negative | 885808 - 886761 | 32672.2 |
| amidohydrolase family protein | D560_0945 | Not Available | Positive | 887087 - 888604 | 56714.2 |
| nmt1-like family protein | D560_0946 | P40400 | Positive | 888621 - 889706 | 38824.1 |
| binding--dependent transport system inner membrane component family protein | D560_0947 | P40401 | Positive | 889729 - 890553 | 29729.3 |
| binding--dependent transport system inner membrane component family protein | D560_0948 | P40401 | Positive | 890550 - 891338 | 28201.0 |
| abc transporter family protein | D560_0949 | P97027 | Positive | 891377 - 892201 | 30122.5 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein | D560_0950 | P54950 | Positive | 892219 - 893568 | 49761.1 |
| molybdenum-pterin binding domain protein | D560_0951 | P45183 | Negative | 893575 - 893790 | 7624.42 |
| mandelate racemase | D560_0952 | P11444 | Negative | 893933 - 894583 | 23690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




