Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family protein | D560_0923 | P23484 | Positive | 866645 - 867148 | 19089.2 |
| fecr family protein | D560_0924 | P23485 | Positive | 867205 - 868140 | 34141.8 |
| tonb-dependent siderophore receptor family protein | D560_0925 | Q05202 | Positive | 868231 - 870618 | 84784.3 |
| mlta-interacting mipa family protein | D560_0926 | Q9AB80 | Negative | 870836 - 871600 | 26881.6 |
| alpha/beta hydrolase fold family protein | D560_0927 | P46542 | Negative | 871755 - 872522 | 27906.1 |
| luciferase-like monooxygenase family protein | D560_0928 | Q48H03 | Negative | 872605 - 873675 | 39176.1 |
| nmt1-like family protein | D560_0929 | Q55107 | Positive | 873901 - 874914 | 35624.0 |
| binding--dependent transport system inner membrane component family protein | D560_0930 | P40401 | Positive | 874983 - 875696 | 25889.9 |
| abc transporter family protein | D560_0931 | Q48C94 | Positive | 875696 - 876481 | 27712.5 |
| putative metal-dependent phosphohydrolase domain protein | D560_0932 | Q3SXD3 | Positive | 876566 - 877414 | 30833.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




