Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb dependent receptor family protein | D560_0863 | P11461 | Positive | 810999 - 812321 | 49068.1 |
| ankyrin repeat family protein | D560_0864 | P77736 | Negative | 812335 - 812466 | 4637.61 |
| ankyrin repeat family protein | D560_0865 | Not Available | Negative | 812454 - 812912 | 16119.2 |
| nad-dependent glycerol-3-phosphate dehydrogenase family protein | D560_0866 | P21336 | Negative | 813174 - 814064 | 31333.6 |
| hypothetical protein | D560_0867 | Not Available | Negative | 814226 - 814399 | 6326.79 |
| tripartite tricarboxylate transporter receptor family protein | D560_0868 | Q45389 | Negative | 814449 - 815408 | 32794.6 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | D560_0869 | Q9AQI0 | Negative | 815468 - 816163 | 24337.4 |
| 4-oxalomesaconate hydratase | D560_0870 | G2IQQ5 | Negative | 816164 - 816688 | 19702.6 |
| prpf family protein | D560_0871 | Q0KJL4 | Negative | 817185 - 818309 | 39275.4 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0872 | Q88JX7 | Positive | 818427 - 819506 | 38981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




