Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 742949 - 745823 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 746141 - 746216 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 746237 - 746313 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 746417 - 747934 | Not Available |
| hypothetical protein | D560_0797 | Not Available | Positive | 748416 - 748556 | 5398.69 |
| putative coenzyme a transferase | D560_0798 | P38946 | Negative | 748916 - 750433 | 54273.5 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0799 | O33945 | Positive | 750657 - 751043 | 14556.9 |
| lysr substrate binding domain protein | D560_0800 | P39592 | Positive | 751080 - 751577 | 17668.4 |
| mechanosensitive ion channel family protein | D560_0801 | P39285 | Positive | 751710 - 754058 | 83511.6 |
| sulfite exporter taue/safe family protein | D560_0802 | Q0K020 | Negative | 754060 - 754812 | 26816.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




