Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surf1 family protein | D560_0753 | Q800L1 | Positive | 707681 - 708226 | 19950.0 |
| dna polymerase i | D560_0754 | P00582 | Negative | 708180 - 710900 | 99551.1 |
| putative lysine decarboxylase family protein | D560_0755 | P48636 | Positive | 710947 - 711582 | 22652.1 |
| hypothetical protein | D560_0756 | Not Available | Positive | 711818 - 712141 | 12161.6 |
| hypothetical protein | D560_0757 | P04979 | Positive | 712149 - 712769 | 22313.0 |
| acetyl-coa c-acetyltransferase family protein | D560_0758 | Q0KBP1 | Negative | 712782 - 713630 | 29319.4 |
| 4-oxalocrotonate tautomerase enzyme family protein | D560_0759 | Q8XRG1 | Negative | 714013 - 714387 | 12568.5 |
| glycine betaine/l-proline transport atp binding subunit | D560_0760 | P17328 | Negative | 714476 - 715729 | 45583.0 |
| binding--dependent transport system inner membrane component family protein | D560_0761 | P14176 | Negative | 715726 - 716583 | 30860.3 |
| substrate binding domain of abc-type glycine betaine transport system family protein | D560_0762 | E0SCY3 | Negative | 716722 - 717717 | 36800.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




