Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | D560_0743 | O86564 | Negative | 696094 - 697485 | 49233.4 |
| na+/pi-cotransporter family protein | D560_0744 | Q8X5Z7 | Positive | 697663 - 699327 | 59307.9 |
| had hydrolase, ia, variant 1 family protein | D560_0745 | P31467 | Positive | 699396 - 700067 | 23753.4 |
| prolyl oligopeptidase family protein | D560_0746 | P71505 | Negative | 700098 - 700892 | 28198.3 |
| zip zinc transporter family protein | D560_0747 | Q5R6I6 | Negative | 700932 - 701780 | 30323.4 |
| major facilitator superfamily protein | D560_0748 | P37643 | Negative | 701873 - 702685 | 28765.8 |
| ubiquinol oxidase, subunit ii | D560_0749 | Q9WWR1 | Positive | 703476 - 704381 | 33295.2 |
| cytochrome o ubiquinol oxidase, subunit i | D560_0750 | P0ABJ0 | Positive | 704413 - 706416 | 75320.7 |
| cytochrome o ubiquinol oxidase, subunit iii | D560_0751 | Q9WWR3 | Positive | 706409 - 707050 | 23445.0 |
| cytochrome o ubiquinol oxidase subunit iv | D560_0752 | P0ABJ7 | Positive | 707047 - 707436 | 14615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




