Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s16 | D560_0703 | Q2KY79 | Negative | 655807 - 656067 | 9530.39 |
| sira-like family protein | D560_0704 | D3RPC0 | Negative | 656567 - 656818 | 9060.8 |
| alanine--trna ligase | D560_0705 | Q2KY72 | Negative | 656805 - 658790 | 70510.6 |
| trna synthetases class ii family protein | D560_0706 | Q2KY72 | Negative | 658757 - 659425 | 24963.5 |
| putative pilin protein | D560_0707 | Not Available | Negative | 660529 - 661065 | 17889.8 |
| putative type iv pilus assembly protein | D560_0708 | Not Available | Negative | 661137 - 662237 | 41278.0 |
| hypothetical protein | D560_0709 | Not Available | Negative | 662230 - 662352 | 4285.25 |
| type ii/iv secretion system family protein | D560_0710 | Q00512 | Negative | 662580 - 663455 | 31550.4 |
| putative type iv pilus assembly protein | D560_0711 | Not Available | Negative | 663448 - 663861 | 14269.0 |
| pilin accessory family protein | D560_0712 | Not Available | Negative | 663875 - 664999 | 41028.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




