Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_0693 | O87406 | Negative | 644180 - 644818 | 23039.3 |
| histidine--trna ligase | D560_0694 | Q2KY92 | Negative | 644822 - 646069 | 46049.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | D560_0695 | Q7WHN0 | Negative | 646150 - 647436 | 46382.7 |
| helix-turn-helix domain protein | D560_0696 | Not Available | Negative | 647449 - 647937 | 17421.7 |
| ribosomal rna large subunit methyltransferase n | D560_0697 | Q2KY87 | Negative | 647934 - 649082 | 42476.2 |
| nucleoside diphosphate kinase family protein | D560_0698 | Q2KY86 | Negative | 649112 - 649537 | 15439.5 |
| valine--trna ligase | D560_0699 | Q7WHM6 | Positive | 649857 - 652736 | 107739.0 |
| transposase family protein | D560_0700 | Q06126 | Negative | 652790 - 654010 | 47493.6 |
| trna (guanine(37)-n(1))-methyltransferase | D560_0701 | Q2KY83 | Negative | 654059 - 654922 | 31327.6 |
| 16s rrna processing protein rimm | D560_0702 | Q2KY81 | Negative | 654922 - 655515 | 21446.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




