Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 56537 - 56629 | Not Available |
| aspartate kinase, monofunctional class | D560_0063 | O69077 | Negative | 56724 - 57983 | 44812.1 |
| trna(ile)-lysidine synthetase | D560_0064 | Q7VX92 | Negative | 58068 - 59054 | 35662.7 |
| acetyl-coa carboxylase, carboxyl transferase, alpha subunit | D560_0065 | Q2KX40 | Negative | 59135 - 60100 | 35706.1 |
| hhh-gpd superbase excision dna repair family protein | D560_0066 | Q92383 | Negative | 60134 - 60778 | 24351.4 |
| cysteine--trna ligase | D560_0067 | Q2KX38 | Negative | 60789 - 62246 | 54008.7 |
| tpr repeat family protein | D560_0068 | Not Available | Positive | 62447 - 63127 | 24865.9 |
| cyclophilin type peptidyl-prolyl cis-trans isomerase/cld family protein | D560_0069 | P23869 | Positive | 63259 - 63765 | 18452.8 |
| udp-2,3-diacylglucosamine hydrolase | D560_0070 | Q7VX99 | Positive | 63758 - 64528 | 28159.4 |
| undecaprenyl-diphosphatase uppp | D560_0071 | A9HXK3 | Negative | 64639 - 65502 | 31310.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




