Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formiminoglutamate deiminase | D560_0643 | Q9HU77 | Positive | 593479 - 594858 | 49971.2 |
| hypothetical protein | D560_0644 | Not Available | Negative | 595081 - 595263 | 6972.54 |
| hypothetical protein | D560_0645 | Not Available | Negative | 595363 - 595497 | 5080.29 |
| beta-ketoacyl synthase, c-terminal domain protein | D560_0646 | P9WQE6 | Positive | 595584 - 597869 | 80883.0 |
| acyl transferase domain protein | D560_0647 | I6XD69 | Positive | 597909 - 599339 | 51949.8 |
| putative polyketide synthase domain protein | D560_0648 | A0A0S6XH49 | Positive | 599312 - 600958 | 58459.3 |
| zinc-binding dehydrogenase family protein | D560_0649 | Q7TXL8 | Positive | 600970 - 603108 | 76393.5 |
| cys/met metabolism plp-dependent enzyme family protein | D560_0650 | Q67N86 | Positive | 603225 - 604517 | 47633.4 |
| 3-deoxy-8-phosphooctulonate synthase | D560_0651 | Q2KVK9 | Positive | 604531 - 605382 | 30605.2 |
| capsule polysaccharide biosynthesis family protein | D560_0652 | P42218 | Negative | 605394 - 606659 | 47312.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




