Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0573 | P30864 | Positive | 533270 - 534214 | 35353.6 |
| smp-30/gluconolaconase/lre-like region family protein | D560_0574 | P0DOV6 | Negative | 534221 - 535099 | 31297.4 |
| enoyl-coa hydratase/isomerase family protein | D560_0575 | O34893 | Positive | 535355 - 536125 | 27893.7 |
| coa binding domain protein | D560_0576 | O29057 | Positive | 536128 - 538260 | 73936.8 |
| acyl-coa dehydrogenase, c-terminal domain protein | D560_0577 | P95280 | Positive | 538544 - 539989 | 52285.8 |
| short chain dehydrogenase family protein | D560_0578 | Q49117 | Positive | 539994 - 540752 | 25910.0 |
| short chain dehydrogenase family protein | D560_0579 | Q53217 | Positive | 540752 - 541915 | 40411.7 |
| carboxymuconolactone decarboxylase family protein | D560_0580 | Not Available | Positive | 541912 - 542637 | 25943.1 |
| tripartite tricarboxylate transporter receptor family protein | D560_0581 | Not Available | Negative | 542671 - 542940 | 9905.69 |
| tripartite tricarboxylate transporter receptor family protein | D560_0582 | P0A177 | Negative | 542937 - 543473 | 18525.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




