Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | D560_0483 | Q06126 | Positive | 451394 - 452614 | 47435.5 |
| rubrerythrin family protein | D560_0484 | Q2KYH8 | Negative | 453082 - 453741 | 23878.6 |
| osmc-like family protein | D560_0485 | P0ADX3 | Positive | 453867 - 454298 | 15079.2 |
| thymidylate synthase | D560_0486 | Q7VUE3 | Positive | 454342 - 455313 | 36728.7 |
| dihydrofolate reductase type 3 | D560_0487 | P12833 | Positive | 455325 - 455798 | 17302.7 |
| bacterial regulatory s, gntr family protein | D560_0488 | Q72LL6 | Negative | 455808 - 457166 | 49654.2 |
| hypothetical protein | D560_0489 | Not Available | Negative | 457244 - 457405 | 6240.56 |
| aminotransferase class-iii family protein | D560_0490 | Q9A3Q9 | Positive | 457370 - 458695 | 47340.8 |
| methylmalonate-semialdehyde dehydrogenase | D560_0491 | Q9I702 | Positive | 458728 - 460221 | 53399.3 |
| hypothetical protein | D560_0492 | Q93CA6 | Positive | 460624 - 461451 | 30298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




