Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter receptor family protein | D560_0463 | Q45389 | Negative | 431322 - 432290 | 33974.3 |
| hamp domain protein | D560_0464 | P59963 | Negative | 432386 - 433696 | 47832.7 |
| dna-binding response regulator | D560_0465 | Q8XBS3 | Negative | 433693 - 434388 | 25360.7 |
| fad binding domain protein | D560_0466 | Q1JPD3 | Negative | 434385 - 435803 | 50050.9 |
| carbamoyl-phosphate synthase l chain, atp binding domain protein | D560_0467 | O04983 | Negative | 435876 - 436520 | 22778.5 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain i family protein | D560_0468 | P57002 | Positive | 436725 - 437237 | 17887.4 |
| phosphoglucomutase/phosphomannomutase, c-terminal domain protein | D560_0469 | P40390 | Positive | 437251 - 438108 | 31488.6 |
| phosphoglucose isomerase family protein | D560_0470 | Q2KYE9 | Positive | 438168 - 438530 | 12901.0 |
| glucose-6-phosphate isomerase | D560_0471 | Q2KYE9 | Positive | 438527 - 439693 | 42808.2 |
| glycosyl transferases group 1 family protein | D560_0472 | Q0P9C9 | Negative | 439690 - 440838 | 41476.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




