Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | D560_0442 | Q7VUH1 | Negative | 416249 - 417181 | 33347.5 |
| Trna-gln | Not Available | Not Available | Positive | 417326 - 417402 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D560_0445 | Q7WNY5 | Negative | 417404 - 418330 | 33098.0 |
| outer membrane lipoprotein lolb | D560_0446 | Q7WNY6 | Negative | 418342 - 418929 | 20888.6 |
| tpr repeat family protein | D560_0447 | P42810 | Negative | 418926 - 420473 | 56289.9 |
| hypothetical protein | D560_0448 | Not Available | Negative | 420623 - 420799 | 6147.38 |
| formamidopyrimidine-dna glycosylase | D560_0449 | Q2KYB7 | Positive | 420813 - 421640 | 30602.2 |
| metallo-beta-lactamase superfamily protein | D560_0450 | Q52556 | Positive | 421758 - 422711 | 35899.5 |
| fad binding domain protein | D560_0451 | B1MM05 | Positive | 422801 - 423244 | 16250.6 |
| putative oxygenase | D560_0452 | Not Available | Positive | 423246 - 423620 | 13274.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




