Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor family protein | D560_0432 | P06971 | Negative | 408402 - 410195 | 66696.5 |
| secretin and tonb n terminus short domain protein | D560_0433 | P06971 | Negative | 410220 - 410789 | 19113.1 |
| fecr family protein | D560_0434 | P23485 | Negative | 410892 - 411560 | 23860.5 |
| hypothetical protein | D560_0435 | Not Available | Negative | 411557 - 412027 | 16386.4 |
| rna polymerase sigma factor, sigma-70 family protein | D560_0436 | P23484 | Negative | 412033 - 412536 | 18514.3 |
| 50s ribosome-binding gtpase family protein | D560_0437 | P0ABU3 | Negative | 412863 - 413954 | 39195.0 |
| hypothetical protein | D560_0438 | Not Available | Positive | 413963 - 414085 | 4243.27 |
| caax protease self-immunity family protein | D560_0439 | Not Available | Negative | 414126 - 414860 | 27456.7 |
| peptidyl-trna hydrolase | D560_0440 | Q2KY99 | Negative | 414860 - 415447 | 21640.2 |
| ribosomal protein l25, ctc-form | D560_0441 | Q2KYA2 | Negative | 415538 - 416131 | 21266.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




