Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase, n-terminal domain protein | D560_0412 | Q7U0Y2 | Positive | 387177 - 388328 | 42260.4 |
| mmge/prpd family protein | D560_0413 | P54956 | Positive | 388349 - 389716 | 48377.5 |
| amp-binding enzyme family protein | D560_0414 | Q0S7V5 | Positive | 389719 - 391263 | 55146.1 |
| alpha/beta hydrolase fold family protein | D560_0415 | D2D3B6 | Negative | 392309 - 393769 | 51222.7 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0416 | Q08597 | Positive | 394269 - 395126 | 31044.1 |
| bacterial extracellular solute-binding s, 5 middle family protein | D560_0417 | P71370 | Positive | 395359 - 395778 | 15146.2 |
| putative monooxygenase | D560_0418 | P54989 | Positive | 395958 - 396098 | 5316.64 |
| tripartite tricarboxylate transporter receptor family protein | D560_0419 | Q44018 | Positive | 396269 - 397240 | 33973.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | D560_0420 | O69787 | Positive | 397279 - 398394 | 41136.8 |
| putative sulfatase | D560_0421 | Not Available | Positive | 398433 - 398726 | 10682.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




