Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | D560_3964 | Q2L258 | Negative | 3686275 - 3687585 | 47971.0 |
| hypothetical protein | D560_3965 | P57929 | Positive | 3687813 - 3688352 | 19946.8 |
| helix-turn-helix domain of transposase isl3 family protein | D560_3966 | Q06126 | Positive | 3688449 - 3688793 | 13445.4 |
| putative transposase | D560_3967 | P25438 | Positive | 3688914 - 3689501 | 20373.8 |
| integrase core domain protein | D560_3968 | Q45618 | Positive | 3689617 - 3690393 | 29265.1 |
| istb-like atp binding family protein | D560_3969 | P15026 | Positive | 3690390 - 3691160 | 28853.8 |
| integrase core domain protein | D560_3970 | P24577 | Positive | 3691321 - 3691905 | 22074.6 |
| hypothetical protein | D560_3971 | Not Available | Negative | 3691873 - 3692364 | 18511.8 |
| 'cold-shock' dna-binding domain protein | D560_3972 | P0A353 | Negative | 3692474 - 3692677 | 7410.81 |
| hypothetical protein | D560_3973 | Not Available | Negative | 3692995 - 3693315 | 11070.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




