Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-ecfsigma factor, chrr | D560_3954 | Not Available | Positive | 3674895 - 3675563 | 24003.1 |
| fad binding domain protein | D560_3955 | O64411 | Positive | 3675560 - 3675811 | 8744.3 |
| putative amine oxidase | D560_3956 | Q54IT3 | Positive | 3675866 - 3676723 | 30681.7 |
| zinc-binding dehydrogenase family protein | D560_3957 | E1ACQ9 | Positive | 3676979 - 3678022 | 36042.7 |
| integrase core domain protein | D560_3958 | P24577 | Positive | 3678511 - 3679332 | 31158.7 |
| repressor lexa | D560_3959 | Q2L247 | Positive | 3679582 - 3680235 | 23187.2 |
| transposase family protein | D560_3960 | Q06126 | Positive | 3680351 - 3681571 | 47435.5 |
| atp-dependent protease la | D560_3961 | P0A9M1 | Negative | 3681622 - 3684051 | 89334.6 |
| atp-dependent clp protease, atp-binding subunit clpx | D560_3962 | Q7WK82 | Negative | 3684217 - 3685515 | 46825.3 |
| atp-dependent clp protease proteolytic subunit | D560_3963 | Q7WK83 | Negative | 3685709 - 3686272 | 20149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




