Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low molecular weight phosphotyrosine phosphatase family protein | D560_3944 | Q55535 | Negative | 3667302 - 3667715 | 15301.0 |
| excinuclease abc subunit b | D560_3945 | Q2L244 | Negative | 3668008 - 3670020 | 75776.0 |
| aminotransferase class i and ii family protein | D560_3946 | P72173 | Positive | 3670113 - 3671315 | 43317.0 |
| integrase core domain protein | D560_3947 | O05086 | Negative | 3671387 - 3671566 | 7126.68 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3948 | P0A9F8 | Negative | 3672142 - 3672765 | 22725.2 |
| short chain dehydrogenase family protein | D560_3949 | O34782 | Positive | 3672990 - 3673328 | 11782.1 |
| enoyl-(acyl carrier) reductase family protein | D560_3950 | A7IQH5 | Positive | 3673645 - 3673761 | 3934.71 |
| hypothetical protein | D560_3951 | Not Available | Positive | 3673826 - 3674107 | 10097.0 |
| osmc-like family protein | D560_3952 | Not Available | Positive | 3674194 - 3674367 | 6088.35 |
| alkylhydroperoxidase ahpd family core domain protein | D560_3953 | Q57498 | Positive | 3674479 - 3674823 | 12329.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




