Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | D560_3924 | A9IQY2 | Positive | 3652168 - 3653682 | 56647.4 |
| hypothetical protein | D560_3925 | Not Available | Positive | 3653856 - 3653981 | 4736.01 |
| methylglyoxal synthase domain protein | D560_3926 | Q72HP3 | Negative | 3654002 - 3654874 | 32113.5 |
| rna polymerase sigma factor, sigma-70 family protein | D560_3927 | P23484 | Positive | 3655025 - 3655546 | 19511.6 |
| fecr family protein | D560_3928 | P23485 | Positive | 3655528 - 3656499 | 35035.8 |
| tonb-dependent receptor plug domain protein | D560_3929 | Q08017 | Positive | 3656686 - 3658032 | 48467.7 |
| integrase core domain protein | D560_3930 | P24577 | Negative | 3658000 - 3658230 | 8874.46 |
| integrase core domain protein | D560_3931 | P24577 | Negative | 3658235 - 3658822 | 22063.0 |
| istb-like atp binding family protein | D560_3932 | P15026 | Negative | 3658977 - 3659747 | 28853.8 |
| integrase core domain protein | D560_3933 | Q45618 | Negative | 3659744 - 3660520 | 29239.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




