Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpch/hpai aldolase/citrate lyase family protein | D560_3904 | A0A0F7GG11 | Positive | 3624664 - 3625464 | 28347.1 |
| tripartite tricarboxylate transporter receptor family protein | D560_3905 | P0A177 | Positive | 3625479 - 3626270 | 27244.5 |
| integrase core domain protein | D560_3906 | P0CF79 | Negative | 3626460 - 3627335 | 33961.6 |
| tripartite tricarboxylate transporter receptor family protein | D560_3907 | P0A177 | Positive | 3627735 - 3628703 | 33575.0 |
| amidohydrolase family protein | D560_3908 | A6XIG7 | Positive | 3628751 - 3629620 | 31095.7 |
| bacterial ig-like domain family protein | D560_3909 | P76347 | Negative | 3629717 - 3634195 | 157884.0 |
| bacterial ig-like domain family protein | D560_3910 | P19809 | Negative | 3634573 - 3638916 | 152881.0 |
| restriction endonuclease family protein | D560_3911 | Not Available | Negative | 3639546 - 3640109 | 20369.1 |
| s4 domain protein | D560_3912 | P0AAS7 | Negative | 3640121 - 3640366 | 8202.87 |
| putative rna polymerase sigma factor feci | D560_3913 | P23484 | Positive | 3640521 - 3641030 | 18985.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




