Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | D560_3894 | P20370 | Positive | 3617093 - 3617509 | 15237.2 |
| nad binding domain of 6-phosphogluconate dehydrogenase family protein | D560_3895 | Q0QLF5 | Positive | 3617695 - 3618423 | 25155.5 |
| succinate semialdehyde dehydrogenase | D560_3896 | P76149 | Positive | 3619150 - 3620151 | 35460.6 |
| hypothetical protein | D560_3897 | Not Available | Negative | 3620148 - 3620405 | 9137.52 |
| lysr substrate binding domain protein | D560_3898 | P27111 | Negative | 3620570 - 3621166 | 21556.6 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3899 | P03030 | Negative | 3621142 - 3621525 | 14019.2 |
| metallo-beta-lactamase superfamily protein | D560_3900 | A4D2B0 | Positive | 3621770 - 3622162 | 13949.1 |
| hypothetical protein | D560_3901 | Not Available | Positive | 3622123 - 3622542 | 15445.3 |
| malate/l-lactate dehydrogenase family protein | D560_3902 | Q9V0D5 | Positive | 3622539 - 3623672 | 39843.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein | D560_3903 | Q58424 | Positive | 3623682 - 3624632 | 34418.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




