Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | D560_0382 | Q7WNT2 | Negative | 357462 - 357950 | 17698.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | D560_0383 | Q7WNT3 | Negative | 357970 - 358488 | 18572.6 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | D560_0384 | Q9JZ77 | Negative | 358498 - 359670 | 41892.0 |
| had hydrolase, iib family protein | D560_0385 | Not Available | Positive | 359804 - 360613 | 29561.2 |
| bacterial transcriptional regulator family protein | D560_0386 | P15360 | Positive | 360619 - 361416 | 28162.3 |
| tonb-dependent siderophore receptor family protein | D560_0387 | Q08017 | Negative | 361454 - 363913 | 88818.8 |
| fecr family protein | D560_0388 | P23485 | Negative | 364027 - 365016 | 36209.3 |
| rna polymerase sigma factor, sigma-70 family protein | D560_0389 | P23484 | Negative | 365013 - 365522 | 19158.1 |
| hypothetical protein | D560_0390 | Not Available | Negative | 365494 - 365763 | 10216.7 |
| phosphate/phosphite/phosphonate abc transporter, periplasmic binding family protein | D560_0391 | O69052 | Positive | 365758 - 366762 | 36969.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




