Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent periplasmic transporter, dctq family | D560_3874 | Q9KQS0 | Positive | 3601474 - 3601794 | 11875.8 |
| integrase core domain protein | D560_3875 | P24577 | Negative | 3601808 - 3601969 | 6030.23 |
| integrase core domain protein | D560_3876 | P24577 | Negative | 3602068 - 3602631 | 21202.9 |
| hypothetical protein | D560_3877 | Not Available | Positive | 3602841 - 3602993 | 5489.71 |
| trap transporter, dctm subunit | D560_3878 | Q312S1 | Positive | 3603141 - 3604439 | 45830.6 |
| trap transporter solute receptor, dctp family protein | D560_3879 | A1WPV4 | Positive | 3604482 - 3605510 | 37781.4 |
| transcription elongation factor greb | D560_3880 | Q9K0C5 | Negative | 3605625 - 3606191 | 21113.9 |
| php domain protein | D560_3881 | Q7NXD4 | Negative | 3606250 - 3607038 | 28172.3 |
| alpha/beta hydrolase fold family protein | D560_3882 | Q4UZP1 | Negative | 3607153 - 3608028 | 31933.1 |
| o-antigen ligase family protein | D560_3883 | P44067 | Negative | 3608280 - 3608894 | 23262.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




