Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-terminal tm domain of oligopeptide transport permease c family protein | D560_3854 | Not Available | Positive | 3585284 - 3585433 | 5323.58 |
| integrase core domain protein | D560_3855 | P24577 | Positive | 3585776 - 3586339 | 21202.9 |
| integrase core domain protein | D560_3856 | P24577 | Positive | 3586438 - 3586599 | 6030.23 |
| binding--dependent transport system inner membrane component family protein | D560_3857 | P77463 | Positive | 3586667 - 3587392 | 26134.8 |
| putative peptide abc transporter atp-binding protein | D560_3858 | A5VU86 | Positive | 3587389 - 3587640 | 8710.58 |
| oligopeptide/dipeptide abc transporter, atp-binding, c-terminal domain protein | D560_3859 | P04285 | Positive | 3587646 - 3588386 | 27031.2 |
| oligopeptide/dipeptide abc transporter, atp-binding, c-terminal domain protein | D560_3860 | P42065 | Positive | 3588383 - 3589393 | 36931.7 |
| bacterial extracellular solute-binding s, 5 middle family protein | D560_3861 | P33950 | Positive | 3589480 - 3590991 | 55313.6 |
| alpha/beta hydrolase family protein | D560_3862 | Q32Q92 | Positive | 3590991 - 3592298 | 46505.9 |
| putative membrane associated protein | D560_3863 | Not Available | Positive | 3592295 - 3592801 | 17981.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




