Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_3834 | Not Available | Positive | 3566929 - 3567684 | 26581.5 |
| phenazine biosynthesis, phzf family protein | D560_3835 | Q98KN6 | Positive | 3567818 - 3568645 | 28999.2 |
| hxlr-like helix-turn-helix family protein | D560_3836 | O31494 | Negative | 3568716 - 3569087 | 13877.1 |
| short chain dehydrogenase family protein | D560_3837 | O54438 | Positive | 3569157 - 3569936 | 27007.2 |
| isoprenylcysteine carboxyl methyltransferase family protein | D560_3838 | Q8TMG0 | Positive | 3570157 - 3570780 | 23376.1 |
| prophage cp4-57 regulatory family protein | D560_3839 | Not Available | Positive | 3571048 - 3571248 | 7921.37 |
| hypothetical protein | D560_3840 | Not Available | Negative | 3571400 - 3571525 | 4457.24 |
| hypothetical protein | D560_3841 | Not Available | Negative | 3571553 - 3572497 | 34872.2 |
| hypothetical protein | D560_3842 | Not Available | Negative | 3572481 - 3573077 | 21338.9 |
| hypothetical protein | D560_3843 | Q8E9K5 | Negative | 3573439 - 3574434 | 37750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




