Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative beta-lactamase | D560_3824 | Not Available | Negative | 3558102 - 3558410 | 11018.1 |
| hypothetical protein | D560_3825 | Not Available | Negative | 3558440 - 3559777 | 47388.0 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3826 | P52696 | Positive | 3559877 - 3560779 | 33397.2 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_3827 | P9WJW2 | Positive | 3560983 - 3561333 | 12863.6 |
| helix-turn-helix family protein | D560_3828 | P37007 | Negative | 3561313 - 3562263 | 35673.8 |
| alka n-terminal domain protein | D560_3829 | P04395 | Positive | 3562538 - 3563371 | 30005.6 |
| methylated-dna-[]-cysteine s-methyltransferase family protein | D560_3830 | P44687 | Positive | 3563380 - 3563916 | 19134.9 |
| putative twin-arginine translocation pathway signal 2 | D560_3831 | Not Available | Negative | 3563938 - 3564495 | 19420.7 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_3832 | P72171 | Positive | 3564954 - 3565970 | 37421.3 |
| acid phosphatase | D560_3833 | P26976 | Positive | 3566476 - 3566925 | 16126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




