Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3804 | P30864 | Negative | 3540232 - 3541119 | 32760.4 |
| inner membrane transport protein ydhp | D560_3805 | P77389 | Positive | 3541222 - 3542424 | 40235.6 |
| major facilitator superfamily protein | D560_3806 | P0AE17 | Negative | 3542443 - 3543495 | 35605.1 |
| hypothetical protein | D560_3807 | Not Available | Negative | 3543647 - 3544063 | 15145.0 |
| fe(3+)-pyochelin receptor | D560_3808 | P42512 | Negative | 3544060 - 3546147 | 76363.5 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_3809 | P40883 | Negative | 3546259 - 3547062 | 28929.0 |
| putative permease domain protein | D560_3810 | O33821 | Negative | 3547143 - 3547409 | 8987.38 |
| major facilitator superfamily protein | D560_3811 | P76242 | Negative | 3547406 - 3547978 | 19093.9 |
| cupin domain protein | D560_3812 | P76241 | Positive | 3548074 - 3548904 | 30404.3 |
| superoxide dismutase | D560_3813 | P0C0F9 | Positive | 3549083 - 3549694 | 22616.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




