Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily protein | D560_3764 | Q7VVJ8 | Positive | 3505470 - 3506102 | 22528.7 |
| queuosine biosynthesis protein qued | D560_3765 | Q1RHI6 | Positive | 3506131 - 3506667 | 19375.6 |
| nitronate monooxygenase family protein | D560_3766 | P20932 | Positive | 3506863 - 3508014 | 41962.9 |
| transposase family protein | D560_3767 | Q06126 | Positive | 3508128 - 3509132 | 38971.3 |
| putative cell division inhibitor protein | D560_3768 | Not Available | Positive | 3510116 - 3510823 | 25259.7 |
| impb/mucb/samb family protein | D560_3769 | Q9A3J2 | Positive | 3510864 - 3511262 | 13890.1 |
| putative required for the error-prone processing of dna lesions along with dnae2 and imua | D560_3770 | Q9A3J2 | Positive | 3511262 - 3512206 | 35268.1 |
| dna polymerase iii, alpha subunit | D560_3771 | Q7WHW8 | Positive | 3512212 - 3515370 | 116174.0 |
| dna-deoxyinosine glycosylase | D560_3772 | Q8TTH3 | Negative | 3515383 - 3515826 | 15959.2 |
| hypothetical protein | D560_3773 | P74369 | Negative | 3515894 - 3516502 | 21394.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




