Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transporter family protein | D560_3754 | P0AFQ4 | Positive | 3499136 - 3500233 | 40273.0 |
| hypothetical protein | D560_3755 | Not Available | Positive | 3500230 - 3500349 | 4216.18 |
| efflux transporter, outer membrane factor (omf) lipo, nodt family protein | D560_3756 | Q51397 | Positive | 3500364 - 3501692 | 47564.2 |
| ybak / prolyl-trna synthetases associated domain protein | D560_3757 | P64484 | Positive | 3501723 - 3502205 | 17405.1 |
| nrde family protein | D560_3758 | Q29RZ5 | Positive | 3502207 - 3503100 | 32516.7 |
| putative exported protein | D560_3759 | Not Available | Positive | 3503151 - 3503540 | 13265.7 |
| mapeg family protein | D560_3760 | Not Available | Negative | 3503553 - 3503909 | 12807.8 |
| putative membrane-associated protease | D560_3761 | Not Available | Positive | 3504069 - 3504467 | 14710.7 |
| caax protease self-immunity family protein | D560_3762 | Not Available | Positive | 3504705 - 3504881 | 5963.34 |
| rf-1 domain protein | D560_3763 | P45388 | Negative | 3504878 - 3505294 | 15589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




