Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | D560_3704 | Q2L008 | Negative | 3453775 - 3454572 | 28351.4 |
| 5'/3'-nucleotidase sure | D560_3705 | Q7WI36 | Negative | 3454557 - 3455315 | 26690.7 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | D560_3706 | Q2L004 | Positive | 3455504 - 3456118 | 21368.8 |
| hypothetical protein | D560_3707 | Not Available | Negative | 3456115 - 3456693 | 21486.5 |
| carboxymuconolactone decarboxylase family protein | D560_3708 | Not Available | Negative | 3456705 - 3457238 | 19146.2 |
| tripartite tricarboxylate transporter receptor family protein | D560_3709 | P27103 | Negative | 3457243 - 3458202 | 33153.9 |
| amidohydrolase family protein | D560_3710 | Q93PS7 | Negative | 3458233 - 3459015 | 28092.9 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3711 | Q08597 | Positive | 3459215 - 3460117 | 32929.3 |
| trna threonylcarbamoyl adenosine modification protein ygjd | D560_3712 | Q2L002 | Negative | 3460119 - 3461054 | 32872.7 |
| permease family protein | D560_3713 | P31466 | Positive | 3461241 - 3462533 | 45188.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




