Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain protein | D560_3694 | P58341 | Negative | 3444608 - 3444808 | 6874.23 |
| copper-translocating p-type atpase | D560_3695 | P58342 | Positive | 3445029 - 3447233 | 76927.7 |
| cu(i)-responsive transcriptional regulator | D560_3696 | P58379 | Positive | 3447230 - 3447625 | 14856.0 |
| 23s rrna (uracil-5-)-methyltransferase ruma | D560_3697 | Q2L016 | Negative | 3447622 - 3449019 | 51200.8 |
| hypothetical protein | D560_3698 | Not Available | Positive | 3449074 - 3449196 | 4387.4 |
| integrase core domain protein | D560_3699 | P24577 | Positive | 3449519 - 3450340 | 31158.7 |
| hypothetical protein | D560_3700 | Not Available | Negative | 3450384 - 3451136 | 26983.4 |
| heavy-metal resistance family protein | D560_3701 | Not Available | Negative | 3451229 - 3451849 | 22714.1 |
| putative 3'-5' exonuclease related to the exonuclease domain of polb family protein | D560_3702 | O27276 | Negative | 3452118 - 3452897 | 29472.7 |
| lysm domain protein | D560_3703 | P45682 | Negative | 3452894 - 3453757 | 29921.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




