Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix family protein | D560_0362 | P42514 | Positive | 336729 - 338213 | 54263.3 |
| putative membrane protein | D560_0363 | Not Available | Positive | 338223 - 338603 | 13663.1 |
| hypothetical protein | D560_0364 | Not Available | Positive | 338600 - 338938 | 11576.6 |
| maleylacetate reductase | D560_0365 | Q45072 | Negative | 338949 - 340010 | 37176.0 |
| tripartite tricarboxylate transporter receptor family protein | D560_0366 | P27103 | Negative | 340028 - 341017 | 34373.2 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0367 | P30864 | Positive | 341156 - 342007 | 31159.7 |
| arginine/agmatine antiporter | D560_0368 | Q9Z6M8 | Positive | 342626 - 344083 | 52372.4 |
| orn/lys/arg decarboxylase, n-terminal domain protein | D560_0369 | P28629 | Positive | 344162 - 346537 | 87159.8 |
| arginine/agmatine antiporter | D560_0370 | Q9Z6M8 | Positive | 346669 - 348108 | 51441.1 |
| hypothetical protein | D560_0371 | Not Available | Positive | 348258 - 348482 | 8425.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




