Bordetella holmesii 5589, F5101

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Bordetella

Description

Bordetella holmesii 5589, F5101 is a microaerophilic bacterium, which indicates that it thrives in environments with reduced oxygen levels. This characteristic is essential for its survival and growth, as it requires specific oxygen concentrations that are lower than those found in the atmosphere. The presence of true flagella suggests that B. holmesii 5589, F5101 is motile, enabling it to navigate its environment, which may be beneficial for colonization and interaction with host organisms. Genomic analysis reveals that B. holmesii 5589, F5101 has three replicons, indicating a complex genetic structure that may contribute to its adaptability and potential pathogenicity. The accession numbers associated with this strain—CP007494.1, CP182515.1, and CP085973.1—provide references for further genomic studies and insights into its genetic makeup. The microaerophilic nature and motility of B. holmesii 5589, F5101 suggest its ecological role in niche environments, potentially within host organisms where oxygen levels are limited. Understanding these traits can enhance our knowledge of its behavior and interactions in microbial ecosystems and its implications in human health, particularly considering that Bordetella species are often associated with respiratory infections. Further research on this bacterium may uncover its pathogenic mechanisms and contribute to the development of targeted treatments or preventive measures.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusBordetella
SpeciesBordetella holmesii
Strain5589, F5101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bordetella holmesii 5589, F5101, Complete Genome

Gene Summary

Adenine Count

688505 bp

Thymine Count

691897 bp

Guanine Count

1157119 bp

Cytosine Count

1162153 bp

Genome Length

3699674 bp

Protein-coding Genes

3912 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
filamentous hemagglutinin family n-terminal domain proteinD560_3684P12255Negative3426945 - 3435602299249.0
eama-like transporter family proteinD560_3685Q9ZE70Positive3436084 - 343703434177.2
abc transporter family proteinD560_3686P0A9T9Negative3437031 - 343771123862.7
gdsl-like lipase/acylhydrolase family proteinD560_3687Q9HZY8Positive3437815 - 343821013795.8
multifunctional acyl-coa thioesterase i and protease i and lysophospholipase l1 domain proteinD560_3688Q9HZY8Positive3438228 - 34383685014.96
sura n-terminal domain proteinD560_3689P0ADY2Negative3438350 - 344030570248.5
glycerophosphoryl diester phosphodiesterase family proteinD560_3690P10908Positive3440697 - 344132622880.0
hypothetical proteinD560_3691P31777Positive3441338 - 344221033078.4
putative dihydrolipoamide dehydrogenaseD560_3692P08332Negative3442221 - 344363350307.4
ahpc/tsa family proteinD560_3693P44758Negative3443743 - 344447126684.9

Displaying genes 3681 – 3690 of 11230 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.