Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | D560_3674 | P10346 | Negative | 3415482 - 3416204 | 26346.0 |
| amino abc transporter, permease, 3-tm region, his/glu/gln/arg/opine family domain protein | D560_3675 | P0AEQ8 | Negative | 3416207 - 3416866 | 23538.0 |
| bacterial extracellular solute-binding s, 3 family protein | D560_3676 | P0AEQ5 | Negative | 3416948 - 3417700 | 26893.3 |
| 6-aminopenicillanic acid acyl-transferase family protein | D560_3677 | Q9W369 | Positive | 3418109 - 3418927 | 29661.0 |
| filamentous hemagglutinin transporter protein fhac | D560_3678 | P35077 | Negative | 3418924 - 3420603 | 62355.6 |
| hypothetical protein | D560_3679 | Q00879 | Negative | 3420680 - 3421657 | 35556.9 |
| type vii secretion system (t7ss), usher family protein | D560_3680 | P33410 | Negative | 3421788 - 3424274 | 89607.7 |
| gram-negative pili assembly chaperone, c-terminal domain protein | D560_3681 | P33409 | Negative | 3424331 - 3424684 | 12801.4 |
| putative major fimbrial structural subunit fima | D560_3682 | P35076 | Negative | 3425232 - 3425603 | 13215.7 |
| transposase family protein | D560_3683 | Q06126 | Negative | 3425635 - 3426807 | 45953.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




